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Author:
Shaohui Xie, Lulu Ding, Ling Liu, Zexuan Zhu
License:
Apache-2.0
Summary:
An end-to-end Transformer-based nanopore signal simulator with basecaller guidance
Latest version:
1.1.2
Required dependencies:
biopython
|
flask
|
h5py
|
mappy
|
numpy
|
ont-bonito
|
ont-remora
|
packaging
|
pandas
|
pod5
|
pysam
|
scipy
|
tensorboard
|
toml
|
torch
|
torchao
|
torchtune
|
tqdm
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