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Author:
None
Summary:
Python port of the R monocle3 package (tracks cole-trapnell-lab/monocle3 1.4.26 @ 4f4239a) — AnnData-based single-cell trajectory, clustering, and differential expression.
Latest version:
1.4.26
Required dependencies:
anndata
|
ggplot2-python
|
ggrepel-python
|
hnswlib
|
leidenalg
|
numpy
|
opentsne
|
pandas
|
patsy
|
pheatmap-python
|
plotly
|
pynndescent
|
python-igraph
|
scales-python
|
scanorama
|
scikit-learn
|
scipy
|
statsmodels
|
umap-learn
Optional dependencies:
build
|
mkdocs
|
mkdocs-jupyter
|
mkdocs-material
|
mkdocstrings
|
pytest
|
pytest-cov
|
ruff
|
twine
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