PyPI page
Home page
Author:
None
License:
GNU General Public License v3 (GPLv3)
Summary:
A pipeline for binning metagenomic datasets from metaHiC data.
Latest version:
1.3.10
Required dependencies:
biopython
|
checkv
|
cooler
|
hicstuff
|
looseversion
|
micomplete
|
networkx
|
numpy
|
pairtools
|
pandas
|
pyfastx
|
pypairix
|
pysam
|
scikit-learn
|
scipy
|
seaborn
Optional dependencies:
autodoc
|
autodocsumm
|
black
|
codecov
|
coverage
|
furo
|
hatch
|
hatch-build-scripts
|
hatchling
|
ipython
|
isort
|
lxml
|
m2r
|
mypy
|
myst-parser
|
nbsphinx
|
pre-commit
|
pydata-sphinx-theme
|
pylint
|
pytest
|
pytest-cov
|
pytest-order
|
pytest-pylint
|
recommonmark
|
ruff
|
sphinx
|
sphinx-autoapi
|
sphinx-autobuild
|
sphinx-click
|
sphinx-rtd-theme
|
sphinxcontrib-napoleon
|
twine
Downloads last day:
4
Downloads last week:
19
Downloads last month:
69