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Author:
Alex Bae, Forrest Collman, Peter Li, Nina Shamsi
Summary:
Skeletonize densely labeled image volumes.
Latest version:
5.8.5
Required dependencies:
click
|
connected-components-3d
|
crackle-codec
|
dijkstra3d
|
edt
|
fastremap
|
fill-voids
|
networkx
|
numpy
|
osteoid
|
pathos
|
posix-ipc
|
psutil
|
pytest
|
scipy
|
tqdm
|
xs3d
Optional dependencies:
crackle-codec
|
microviewer
|
nibabel
|
pykdtree
|
pynrrd
|
tifffile
|
vtk
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