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Author:
Andrey Prjibelski
License:
GPL-2.0-only
Summary:
Reference-based analysis and quantification of long RNA reads
Latest version:
4.0.0
Required dependencies:
biopython
|
editdistance
|
gffutils
|
intervaltree
|
mappy
|
matplotlib
|
numba
|
numpy
|
pandas
|
pyfaidx
|
pysam
|
pyyaml
|
scikit-learn
|
scipy
|
seaborn
|
ssw-py
|
xgboost
Optional dependencies:
coverage
|
pytest
|
pytest-cov
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