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Author:
Julian de Ruiter
License:
MIT license
Summary:
Tool for identifying transposon insertions in Insertional Mutagenesis screens from gene-transposon fusions using single- and paired-end RNA-sequencing data.
Latest version:
0.3.2
Required dependencies:
future
|
htseq
|
intervaltree
|
matplotlib
|
numexpr
|
pandas
|
pathlib2
|
pyfaidx
|
pysam
|
scipy
|
seaborn
|
toolz
|
typing
Optional dependencies:
bumpversion
|
pytest
|
pytest-cov
|
pytest-helpers-namespace
|
pytest-mock
|
python-coveralls
|
rpy2
|
seaborn
|
sphinx
|
sphinx-autobuild
|
sphinx-rtd-theme
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