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Author:
Jordao Bragantini
License:
MIT
Summary:
Inference and tracking for the Higher-Order Cell Tracking Transformer (HOCT) model
Latest version:
0.3.0
Required dependencies:
dask
|
gurobipy
|
h5py
|
matplotlib
|
numpy
|
polars
|
pooch
|
pydantic
|
pyyaml
|
rich
|
scikit-image
|
scipy
|
spatial-graph
|
tifffile
|
toolz
|
torch
|
tracksdata
|
typer
|
zarr
Optional dependencies:
bioio
|
bioio-tifffile
|
click
|
napari
|
pre-commit
|
pytest
|
pytest-cov
|
ruff
|
scikit-learn
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