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Author:
Kuan-Hao Chao
License:
Apache-2.0
Summary:
GFFBase — Rust-accelerated GFF3/GTF parser with a DuckDB-backed storage engine and a drop-in gffutils-compatible Python API.
Latest version:
0.3.0
Required dependencies:
duckdb
|
pyarrow
Optional dependencies:
biopython
|
furo
|
gffutils
|
hypothesis
|
matplotlib
|
maturin
|
memory-profiler
|
mypy
|
packaging
|
pandas
|
polars
|
psutil
|
pybedtools
|
pyfaidx
|
pytest
|
pytest-cov
|
pyyaml
|
ruff
|
sphinx
|
sphinx-copybutton
|
sphinx-design
|
tomli
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