PyPI page
Author:
David Laub
Summary:
Pipeline for efficient genomic data processing.
Latest version:
0.43.1
Required dependencies:
awkward
|
cyvcf2
|
einops
|
filelock
|
genoray
|
hirola
|
joblib
|
loguru
|
more-itertools
|
natsort
|
numpy
|
pandera
|
polars
|
pooch
|
pyarrow
|
pybigwig
|
pydantic
|
pydantic-extra-types
|
pyranges
|
pysam
|
seqpro
|
tqdm
Optional dependencies:
genvarloader-cli
|
pyomp
|
tbb
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