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Author:
Ficklin and Feltus computational Labs (Washington State University & Clemson University)
License:
GNU General Public License v3.0
Summary:
FUNC-E is a python library and script for functional enrichment of gene lists. It follows a similar approach to that of DAVID (https://david.ncifcrf.gov/) in that it performs enrichment analysis using a Fisher's test but then clusters enriched annotations using Kappa Statistics. FUNC-E allows the user to provide their own annotation lists. It is fully executable on a UNIX command-line.
Latest version:
2.0.1
Required dependencies:
numpy
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pandas
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progressbar2
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requests
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scikit-learn
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scipy
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statsmodels
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