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Author:
Parashar Dhapola
Summary:
Out-of-core, graph-first workflows for million-cell RNA-seq and CITE-seq
Latest version:
1.1.0
Required dependencies:
h5py
|
hnswlib
|
huggingface-hub
|
igraph
|
leidenalg
|
loguru
|
networkx
|
numba
|
numcodecs
|
numpy
|
obstore
|
packaging
|
pandas
|
scikit-learn
|
scipy
|
statsmodels
|
threadpoolctl
|
tqdm
|
umap-learn
|
zarr
|
zstandard
Optional dependencies:
anndata
|
duckdb
|
httpx
|
ipykernel
|
ipython-autotime
|
ipywidgets
|
jupytext
|
kneed
|
matplotlib
|
myst-parser
|
mystmd
|
nbclient
|
pydantic-ai-slim
|
pytest
|
pytest-cov
|
pytest-xdist
|
pytz
|
rdata
|
scikit-network
|
seaborn
|
sgtsnepi
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
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