PyPI page
Author:
Mahdi Shafiei
License:
MIT License
Copyright (c) 2026 Mahdi Shafiei
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated docu...
Summary:
Cellifex — an AI/ML-native cell-state dynamics foundation model
Latest version:
0.0.1
Required dependencies:
avitai-artifex
|
calibrax
|
cobra
|
datarax
|
diffbio
|
diffrax
|
equinox
|
flax
|
jax
|
jaxtyping
|
lineax
|
numpy
|
opifex
|
optax
|
orbax-checkpoint
|
pandas
|
pyyaml
|
scipy
|
substrax
|
tomli-w
Optional dependencies:
bandit
|
blackjax
|
build
|
deadcode
|
deptry
|
efmtool
|
equilibrator-api
|
equilibrator-pathway
|
griffe
|
hippogriffe
|
import-linter
|
interrogate
|
ipykernel
|
jax
|
jax-metal
|
jupytext
|
memote
|
mkdocs
|
mkdocs-include-exclude-files
|
mkdocs-ipynb
|
mkdocs-jupyter
|
mkdocs-material
|
mkdocstrings
|
mkdocstrings-python
|
mpax
|
nvidia-cublas-cu12
|
nvidia-cuda-cupti-cu12
|
nvidia-cuda-nvcc-cu12
|
nvidia-cuda-nvrtc-cu12
|
nvidia-cuda-runtime-cu12
|
nvidia-cudnn-cu12
|
nvidia-cufft-cu12
|
nvidia-curand-cu12
|
nvidia-cusolver-cu12
|
nvidia-cusparse-cu12
|
nvidia-nccl-cu12
|
nvidia-nvjitlink-cu12
|
nvidia-nvtx-cu12
|
pre-commit
|
pygments
|
pylint
|
pymdown-extensions
|
pyright
|
pytest
|
pytest-asyncio
|
pytest-cov
|
pytest-env
|
pytest-json-report
|
pytest-randomly
|
pytest-timeout
|
pytest-xdist
|
radon
|
ruff
|
scikit-learn
|
shellcheck-py
|
straindesign
|
tellurium
|
toml-sort
|
vulture
|
wemake-python-styleguide
|
xenon
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