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amr-clonalshare


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Author: Maciej Kochanowski
Summary: Lineage structure in antimicrobial susceptibility tables: the lineage share of calls and of the recorded MIC ordering, and the lineage share of the unobserved MIC ordering that censored readings guarantee, with valid confidence limits.
Latest version: 1.0.0
Required dependencies: numpy | pandas | pyyaml | scipy | threadpoolctl
Optional dependencies: build | hypothesis | mkdocs-material | mkdocstrings | mpmath | mypy | openpyxl | pytest | pytest-cov | ruff | scikit-learn | types-pyyaml

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